Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Gm3786-201ENSMUST00000202659 378 ntBASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Gm9176-201ENSMUST00000219955 1120 ntBASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Hfm1D3Z4R1 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Gm13123-201ENSMUST00000122173 492 ntBASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Gm44985-201ENSMUST00000206202 1016 ntBASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Mettl6-204ENSMUST00000227595 1027 ntBASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Hfm1D3Z4R1 Camk2g-217ENSMUST00000226630 1937 ntBASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Gm15770-201ENSMUST00000117498 584 ntBASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Gm12749-201ENSMUST00000122138 1159 ntBASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Gm38144-201ENSMUST00000192790 465 ntBASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Gm6621-201ENSMUST00000193251 772 ntBASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Zhx1-202ENSMUST00000110168 5212 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC19.54■□□□□ 0.72
Hfm1D3Z4R1 Gm45684-201ENSMUST00000210244 1571 ntBASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Gm10040-201ENSMUST00000080726 1662 ntBASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Gm24255-201ENSMUST00000104481 128 ntBASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Gm16379-201ENSMUST00000161469 348 ntBASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Gm6222-202ENSMUST00000182143 629 ntBASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Gm8762-201ENSMUST00000193486 339 ntBASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Gm7118-201ENSMUST00000200167 1003 ntBASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
Hfm1D3Z4R1 Mvp-202ENSMUST00000165096 2837 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Eif3i-201ENSMUST00000102593 1123 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Trav4d-3-201ENSMUST00000103592 331 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Trav4d-4-201ENSMUST00000103600 354 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Trav4n-3-201ENSMUST00000103618 331 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Trav4n-4-201ENSMUST00000103627 354 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Trav4-3-201ENSMUST00000103655 411 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Trav4-4-dv10-201ENSMUST00000103663 361 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Tmcc1-205ENSMUST00000173031 1024 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Gm2991-201ENSMUST00000173338 480 ntBASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Gm37312-201ENSMUST00000195753 685 ntTSL 5 BASIC19.52■□□□□ 0.72
Hfm1D3Z4R1 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms