Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Syce3B5KM66 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
Syce3B5KM66 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC16.22■□□□□ 0.19
Syce3B5KM66 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC16.22■□□□□ 0.19
Syce3B5KM66 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 AC139054.1-201ENSMUST00000226898 1598 ntBASIC16.22■□□□□ 0.19
Syce3B5KM66 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC16.22■□□□□ 0.19
Syce3B5KM66 4933405L10Rik-201ENSMUST00000013302 1214 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC16.22■□□□□ 0.19
Syce3B5KM66 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC16.22■□□□□ 0.19
Syce3B5KM66 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
Syce3B5KM66 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC16.22■□□□□ 0.19
Syce3B5KM66 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
Syce3B5KM66 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
Syce3B5KM66 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Syce3B5KM66 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Nudt18-203ENSMUST00000228768 1578 ntBASIC16.21■□□□□ 0.19
Syce3B5KM66 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Hmga2-203ENSMUST00000159699 3810 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC16.21■□□□□ 0.19
Syce3B5KM66 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Syce3B5KM66 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
Syce3B5KM66 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Gm11764-201ENSMUST00000120221 623 ntBASIC16.21■□□□□ 0.19
Syce3B5KM66 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC16.21■□□□□ 0.19
Syce3B5KM66 Gm33142-201ENSMUST00000193913 867 ntBASIC16.21■□□□□ 0.19
Syce3B5KM66 Spr-ps1-201ENSMUST00000089584 605 ntBASIC16.21■□□□□ 0.19
Syce3B5KM66 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Tmprss9-203ENSMUST00000219817 3581 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
Syce3B5KM66 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC16.21■□□□□ 0.19
Syce3B5KM66 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC16.21■□□□□ 0.19
Syce3B5KM66 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.21■□□□□ 0.19
Syce3B5KM66 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Srrm1-202ENSMUST00000084846 3740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
Syce3B5KM66 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
Syce3B5KM66 Gm37795-201ENSMUST00000194216 2459 ntBASIC16.21■□□□□ 0.18
Syce3B5KM66 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Syce3B5KM66 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.18
Syce3B5KM66 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC16.21■□□□□ 0.18
Syce3B5KM66 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Syce3B5KM66 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.18
Syce3B5KM66 Gm13294-201ENSMUST00000121757 1330 ntBASIC16.2■□□□□ 0.18
Syce3B5KM66 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC16.2■□□□□ 0.18
Syce3B5KM66 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC16.2■□□□□ 0.18
Syce3B5KM66 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Syce3B5KM66 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC16.2■□□□□ 0.18
Syce3B5KM66 Gm9182-201ENSMUST00000217829 639 ntBASIC16.2■□□□□ 0.18
Syce3B5KM66 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC16.2■□□□□ 0.18
Syce3B5KM66 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
Syce3B5KM66 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms