Protein–RNA interactions for Protein: B2RS91

Rrn3, RNA polymerase I-specific transcription initiation factor RRN3, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rrn3B2RS91 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Rrn3B2RS91 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Gm24543-201ENSMUST00000103867 82 ntBASIC14.29□□□□□ -0.12
Rrn3B2RS91 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Rrn3B2RS91 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Gm14767-201ENSMUST00000121559 586 ntBASIC14.28□□□□□ -0.12
Rrn3B2RS91 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.28□□□□□ -0.12
Rrn3B2RS91 Gm23547-201ENSMUST00000158210 271 ntBASIC14.28□□□□□ -0.12
Rrn3B2RS91 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Gm10576-201ENSMUST00000191927 825 ntBASIC14.28□□□□□ -0.12
Rrn3B2RS91 Gm42632-201ENSMUST00000201707 2411 ntBASIC14.28□□□□□ -0.12
Rrn3B2RS91 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.28□□□□□ -0.12
Rrn3B2RS91 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Rrn3B2RS91 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.27□□□□□ -0.12
Rrn3B2RS91 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
Rrn3B2RS91 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Gm13453-201ENSMUST00000118708 357 ntBASIC14.27□□□□□ -0.13
Rrn3B2RS91 Gm15653-201ENSMUST00000119247 907 ntBASIC14.27□□□□□ -0.13
Rrn3B2RS91 Mir7023-201ENSMUST00000185093 64 ntBASIC14.27□□□□□ -0.13
Rrn3B2RS91 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Tub-202ENSMUST00000119474 2097 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Rrn3B2RS91 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms