Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Lrguk-202ENSMUST00000101564 967 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm25261-201ENSMUST00000157416 134 ntBASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm6334-201ENSMUST00000207083 228 ntBASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 CT573086.1-201ENSMUST00000227202 1074 ntBASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Col4a6B1AVK5 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Papd7-204ENSMUST00000223344 2118 ntAPPRIS P2 TSL 3 BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Gm14209-201ENSMUST00000154946 462 ntTSL 5 BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Gm6222-202ENSMUST00000182143 629 ntBASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Ighv1-62-201ENSMUST00000193406 350 ntBASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Gm42627-201ENSMUST00000197347 224 ntBASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Gm37728-201ENSMUST00000195025 2292 ntBASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.29□□□□□ -0.12
Col4a6B1AVK5 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Fam117b-201ENSMUST00000036540 5532 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Gm18056-201ENSMUST00000207670 568 ntBASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Gm18061-201ENSMUST00000208350 562 ntBASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Gm18063-201ENSMUST00000208529 568 ntBASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Gm18052-201ENSMUST00000208750 559 ntBASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 n-R5s195-201ENSMUST00000082891 119 ntBASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Col4a6B1AVK5 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.27□□□□□ -0.12
Col4a6B1AVK5 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Pced1c-ps-201ENSMUST00000187740 751 ntBASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 1700007G11Rik-201ENSMUST00000080333 861 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Cant1-203ENSMUST00000106287 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Col4a6B1AVK5 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms