Protein–RNA interactions for Protein: Q9Z2L7

Crlf3, Cytokine receptor-like factor 3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Crlf3Q9Z2L7 Dlg4-201ENSMUST00000018700 3204 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Gm8096-201ENSMUST00000209921 1591 ntBASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Gm13036-201ENSMUST00000117799 748 ntBASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Gm6184-201ENSMUST00000120403 1261 ntBASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Gm16160-201ENSMUST00000160105 781 ntTSL 2 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Crlf3Q9Z2L7 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Psmb5-202ENSMUST00000227257 622 ntBASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Mrpl20-201ENSMUST00000030942 764 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 AC119177.1-201ENSMUST00000227647 1332 ntBASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Crlf3Q9Z2L7 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Gm11764-201ENSMUST00000120221 623 ntBASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Gm27628-201ENSMUST00000184911 107 ntBASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Gm8000-201ENSMUST00000188378 592 ntBASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Gm43935-201ENSMUST00000203569 1050 ntBASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Gm45167-201ENSMUST00000208007 322 ntBASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Crlf3Q9Z2L7 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 659.3 ms