Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Gm12485-201ENSMUST00000119641 291 ntBASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Scn8aQ9WTU3 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Xylt2-201ENSMUST00000116349 3442 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Gm14928-201ENSMUST00000120198 477 ntBASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Atp6v1f-203ENSMUST00000149646 806 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Gm27772-201ENSMUST00000184900 187 ntBASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Gm5186-201ENSMUST00000218781 920 ntBASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 AC166997.1-201ENSMUST00000225122 572 ntBASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Bckdha-201ENSMUST00000071329 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Scn8aQ9WTU3 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Gm11557-201ENSMUST00000120200 1008 ntBASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Gm23984-201ENSMUST00000157139 203 ntBASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Gm8927-201ENSMUST00000181978 981 ntBASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Gm8463-201ENSMUST00000208573 613 ntBASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 AC154239.3-201ENSMUST00000226933 674 ntBASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Mzt2-201ENSMUST00000023351 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Gm3222-201ENSMUST00000071282 990 ntBASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Dhrs3-207ENSMUST00000171001 1349 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Gprin1-201ENSMUST00000099506 4141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Smyd4-201ENSMUST00000044530 3517 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Gm15889-202ENSMUST00000212669 2443 ntBASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Scn8aQ9WTU3 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 53.4 ms