Protein–RNA interactions for Protein: Q9R1R2

Trim3, Tripartite motif-containing protein 3, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim3Q9R1R2 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Gm25287-201ENSMUST00000103846 110 ntBASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Gm22918-201ENSMUST00000103855 110 ntBASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Gm2810-201ENSMUST00000118681 990 ntBASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.37□□□□□ -0.27
Trim3Q9R1R2 AC131710.1-201ENSMUST00000228336 990 ntBASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Trim3Q9R1R2 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Plekhb1-202ENSMUST00000107043 931 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Gm27920-201ENSMUST00000183953 96 ntBASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Trim3Q9R1R2 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Gm22065-201ENSMUST00000103753 110 ntBASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Gm22066-201ENSMUST00000103761 110 ntBASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Gm24932-201ENSMUST00000103763 110 ntBASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Gm24115-201ENSMUST00000103799 110 ntBASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Gm22190-201ENSMUST00000103827 110 ntBASIC13.35□□□□□ -0.27
Trim3Q9R1R2 Gm22191-201ENSMUST00000103831 110 ntBASIC13.35□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms