Protein–RNA interactions for Protein: Q9R1Q9

Atp6ap1, V-type proton ATPase subunit S1, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atp6ap1Q9R1Q9 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Atp6ap1Q9R1Q9 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.9□□□□□ -0.19
Atp6ap1Q9R1Q9 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Atp6ap1Q9R1Q9 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Atp6ap1Q9R1Q9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.19
Atp6ap1Q9R1Q9 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.19
Atp6ap1Q9R1Q9 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Atp6ap1Q9R1Q9 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Gm45751-201ENSMUST00000210185 1573 ntBASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Gm15693-201ENSMUST00000120470 637 ntBASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Atp6ap1Q9R1Q9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Dhrs4-201ENSMUST00000022821 1392 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Mir125a-201ENSMUST00000083545 68 ntBASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Atp6ap1Q9R1Q9 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms