Protein–RNA interactions for Protein: Q9D2H5

Trim42, Tripartite motif-containing protein 42, mousemouse

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim42Q9D2H5 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Acot6-202ENSMUST00000222921 3622 ntBASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Trim42Q9D2H5 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC14.21□□□□□ -0.14
Trim42Q9D2H5 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim42Q9D2H5 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim42Q9D2H5 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim42Q9D2H5 Lmbr1-203ENSMUST00000196321 3422 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Trim42Q9D2H5 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.14
Trim42Q9D2H5 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Trim42Q9D2H5 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Irx6-201ENSMUST00000034185 3370 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Gm20632-201ENSMUST00000176760 2427 ntBASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 2210408F21Rik-212ENSMUST00000152157 490 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Gm21362-201ENSMUST00000194272 928 ntBASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Paupar-201ENSMUST00000194826 3482 ntBASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Trim42Q9D2H5 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Gm9279-201ENSMUST00000223175 1606 ntBASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Nfs1-202ENSMUST00000109600 709 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 A730015C16Rik-201ENSMUST00000164855 1221 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Gm27357-201ENSMUST00000183754 135 ntBASIC14.19□□□□□ -0.14
Trim42Q9D2H5 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms