Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Ppp1r16b-203ENSMUST00000103116 6370 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Crhbp-202ENSMUST00000221025 1779 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Ptprt-204ENSMUST00000109445 12082 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Kdm2b-203ENSMUST00000086200 4999 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Fmr1nb-201ENSMUST00000069731 799 ntAPPRIS ALT2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Sel1l-204ENSMUST00000167466 5544 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Tsku-201ENSMUST00000094161 2760 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Rimbp2-204ENSMUST00000198941 6446 ntAPPRIS P3 TSL 2 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Zscan12-203ENSMUST00000225545 4405 ntAPPRIS P1 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Fhl1-201ENSMUST00000023854 2356 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 LMLN2-201ENSMUST00000224691 2342 ntAPPRIS P5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 AC149222.1-201ENSMUST00000154987 5188 ntAPPRIS P5 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Tpm2-201ENSMUST00000030184 2175 ntTSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Sh3tc1-201ENSMUST00000070203 4549 ntAPPRIS P1 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC9.43□□□□□ -0.9
Mrpl55Q9CZ83 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Tanc2-202ENSMUST00000100330 11855 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Mettl14-201ENSMUST00000029759 2741 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Otud7b-202ENSMUST00000090785 8101 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Prr15-201ENSMUST00000059138 1511 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Cep350-204ENSMUST00000138762 13307 ntAPPRIS P1 TSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 AC131586.3-201ENSMUST00000228355 1367 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Zgpat-201ENSMUST00000029105 2293 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gm11455-201ENSMUST00000149285 733 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gm17271-201ENSMUST00000165535 355 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gm18489-201ENSMUST00000172565 551 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gm5253-201ENSMUST00000187104 1025 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gm45167-201ENSMUST00000208007 322 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 AC127302.2-201ENSMUST00000215212 268 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 CT943659.1-201ENSMUST00000215459 326 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 AC174742.1-201ENSMUST00000218272 304 ntBASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Zbtb40-201ENSMUST00000049583 7192 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Trmt1l-201ENSMUST00000065625 2749 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC9.42□□□□□ -0.9
Mrpl55Q9CZ83 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC9.42□□□□□ -0.9
Retrieved 100 of 76,532 protein–RNA pairs in 55.4 ms