Protein–RNA interactions for Protein: Q9CPR6

Krt88, Keratin 88, mousemouse

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt88Q9CPR6 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 CT025610.1-201ENSMUST00000224552 1786 ntBASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Krt88Q9CPR6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 AC155298.2-201ENSMUST00000225485 6226 ntBASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Gm7153-201ENSMUST00000117092 455 ntBASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Gm8597-201ENSMUST00000191525 1109 ntBASIC12.8□□□□□ -0.36
Krt88Q9CPR6 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Gm13344-201ENSMUST00000137714 1557 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Krt88Q9CPR6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 AC164565.1-201ENSMUST00000217520 1484 ntBASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm24589-201ENSMUST00000116692 94 ntBASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm45167-201ENSMUST00000208007 322 ntBASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm7461-201ENSMUST00000058918 827 ntBASIC12.79□□□□□ -0.36
Krt88Q9CPR6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Krt88Q9CPR6 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Il17rd-203ENSMUST00000225146 3366 ntBASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Krt88Q9CPR6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms