Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Gm12350-201ENSMUST00000121208 462 ntBASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Gm37230-201ENSMUST00000194491 818 ntBASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Grk6-205ENSMUST00000224653 2976 ntBASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Ikzf1-204ENSMUST00000076700 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Trim8Q99PJ2 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.91□□□□□ -0.18
Trim8Q99PJ2 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Gm16026-204ENSMUST00000162652 683 ntBASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
Trim8Q99PJ2 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Fxyd5-208ENSMUST00000161805 1166 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Mir5126-201ENSMUST00000175513 77 ntBASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Gm5145-201ENSMUST00000095633 837 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Gad2-201ENSMUST00000028123 5744 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Trim8Q99PJ2 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim8Q99PJ2 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.19
Trim8Q99PJ2 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
Trim8Q99PJ2 Gm11873-201ENSMUST00000117877 1304 ntBASIC13.9□□□□□ -0.19
Trim8Q99PJ2 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.89□□□□□ -0.19
Trim8Q99PJ2 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms