Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Slc6a11-201ENSMUST00000032451 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.15□□□□□ -0.14
Cdh23Q99PF4 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Gm42900-201ENSMUST00000197184 2167 ntBASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Derl1-201ENSMUST00000022993 3175 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Cdh23Q99PF4 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Gm11439-201ENSMUST00000118598 409 ntBASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 AC115735.4-201ENSMUST00000227460 1944 ntBASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Ero1l-201ENSMUST00000022378 4418 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Gm2260-201ENSMUST00000184965 657 ntBASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Gm44126-201ENSMUST00000204831 514 ntBASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Cerk-201ENSMUST00000044332 4518 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Abhd6-203ENSMUST00000225234 1958 ntBASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Ighv1-61-201ENSMUST00000103531 351 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Gm12201-201ENSMUST00000120657 1234 ntBASIC14.14□□□□□ -0.15
Cdh23Q99PF4 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Cdh23Q99PF4 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Dlx5-202ENSMUST00000142635 1324 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm16379-201ENSMUST00000161469 348 ntBASIC14.13□□□□□ -0.15
Cdh23Q99PF4 1700120C14Rik-202ENSMUST00000187967 391 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm8762-201ENSMUST00000193486 339 ntBASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm11964-201ENSMUST00000120982 444 ntBASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Stambp-ps1-201ENSMUST00000209280 1208 ntBASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Nmnat1-201ENSMUST00000030845 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Pld4-201ENSMUST00000063888 1982 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm23200-201ENSMUST00000104379 132 ntBASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Gm5869-201ENSMUST00000200248 1257 ntBASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Lsm7-201ENSMUST00000035775 468 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Cdh23Q99PF4 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms