Protein–RNA interactions for Protein: Q99MT2

Msh4, MutS protein homolog 4, mousemouse

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh4Q99MT2 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Gm16845-201ENSMUST00000180419 1415 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Gm13464-201ENSMUST00000119418 935 ntBASIC13.85□□□□□ -0.19
Msh4Q99MT2 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Mir6956-201ENSMUST00000183598 62 ntBASIC13.85□□□□□ -0.19
Msh4Q99MT2 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.85□□□□□ -0.19
Msh4Q99MT2 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Hnrnpa2b1-210ENSMUST00000204188 1518 ntTSL 5 BASIC13.85□□□□□ -0.19
Msh4Q99MT2 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Msh4Q99MT2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Msh4Q99MT2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Msh4Q99MT2 Tsc2-221ENSMUST00000228412 5432 ntAPPRIS ALT2 BASIC13.83□□□□□ -0.19
Msh4Q99MT2 Gm5089-201ENSMUST00000081580 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gm44872-201ENSMUST00000207864 420 ntBASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gm5779-201ENSMUST00000218467 910 ntBASIC13.83□□□□□ -0.2
Msh4Q99MT2 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Msh4Q99MT2 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.82□□□□□ -0.2
Msh4Q99MT2 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Msh4Q99MT2 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms