Protein–RNA interactions for Protein: Q99LF4

Rtcb, tRNA-splicing ligase RtcB homolog, mousemouse

Known RBP Predictions only

Length 505 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RtcbQ99LF4 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC17.41■□□□□ 0.38
RtcbQ99LF4 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
RtcbQ99LF4 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Nkpd1-202ENSMUST00000207576 2916 ntAPPRIS P2 TSL 5 BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Mmgt2-207ENSMUST00000155759 589 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Gm37305-201ENSMUST00000195714 4279 ntBASIC17.4■□□□□ 0.38
RtcbQ99LF4 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC17.4■□□□□ 0.38
RtcbQ99LF4 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
RtcbQ99LF4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC17.4■□□□□ 0.38
RtcbQ99LF4 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
RtcbQ99LF4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.38
RtcbQ99LF4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC17.39■□□□□ 0.38
RtcbQ99LF4 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.38
RtcbQ99LF4 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.38
RtcbQ99LF4 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 AC161252.3-201ENSMUST00000225465 1549 ntBASIC17.39■□□□□ 0.37
RtcbQ99LF4 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Gm14723-201ENSMUST00000118686 215 ntBASIC17.39■□□□□ 0.37
RtcbQ99LF4 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Gm4959-201ENSMUST00000197271 1044 ntBASIC17.39■□□□□ 0.37
RtcbQ99LF4 AC131777.1-201ENSMUST00000214749 387 ntTSL 3 BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Gm17383-201ENSMUST00000078739 1041 ntBASIC17.39■□□□□ 0.37
RtcbQ99LF4 Mir497b-201ENSMUST00000093601 125 ntBASIC17.39■□□□□ 0.37
RtcbQ99LF4 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Col13a1-205ENSMUST00000105454 3162 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Gm12846-201ENSMUST00000120431 1373 ntBASIC17.39■□□□□ 0.37
RtcbQ99LF4 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
RtcbQ99LF4 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
RtcbQ99LF4 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.38■□□□□ 0.37
RtcbQ99LF4 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Gm8810-201ENSMUST00000172895 754 ntBASIC17.38■□□□□ 0.37
RtcbQ99LF4 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.38■□□□□ 0.37
RtcbQ99LF4 Gm8598-201ENSMUST00000221184 836 ntBASIC17.38■□□□□ 0.37
RtcbQ99LF4 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC17.38■□□□□ 0.37
RtcbQ99LF4 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC17.38■□□□□ 0.37
RtcbQ99LF4 Sybu-209ENSMUST00000228639 4113 ntBASIC17.37■□□□□ 0.37
RtcbQ99LF4 Rgs9-201ENSMUST00000020920 2434 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Gm19184-201ENSMUST00000196798 928 ntBASIC17.37■□□□□ 0.37
RtcbQ99LF4 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RtcbQ99LF4 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 26.4 ms