Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Comtd1-202ENSMUST00000124549 2314 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
Pcdhb20Q91XZ9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 AC160966.1-202ENSMUST00000216860 1318 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 AC154767.3-201ENSMUST00000225150 1342 ntBASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Hs3st3a1-201ENSMUST00000058652 3939 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Kdm6b-201ENSMUST00000094077 6654 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm11588-201ENSMUST00000141758 658 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm28450-201ENSMUST00000187349 638 ntBASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm29436-202ENSMUST00000189054 1172 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm43731-201ENSMUST00000196150 666 ntTSL 3 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm17838-201ENSMUST00000205872 876 ntBASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Olfr752-ps1-201ENSMUST00000208736 1141 ntBASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 AC159114.1-201ENSMUST00000220349 266 ntBASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 AC154634.2-201ENSMUST00000225983 1184 ntBASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Mrpl4-201ENSMUST00000003386 1288 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Scgb2b24-201ENSMUST00000055444 523 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 4933404K08Rik-201ENSMUST00000156977 1434 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Pcdhb20Q91XZ9 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Adgrb2-208ENSMUST00000121049 4871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Elk3-204ENSMUST00000151153 1336 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Gm45605-201ENSMUST00000210265 4269 ntBASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Gm8410-201ENSMUST00000117225 605 ntBASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 2700069I18Rik-201ENSMUST00000128815 1020 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Aknaos-201ENSMUST00000144095 1104 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Gm8480-201ENSMUST00000190350 698 ntBASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Sult3a1-202ENSMUST00000218204 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Olfr816-201ENSMUST00000071605 939 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Ipcef1-202ENSMUST00000086896 1196 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Sult3a1-201ENSMUST00000092597 1047 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Pcdhb20Q91XZ9 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb20Q91XZ9 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb20Q91XZ9 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb20Q91XZ9 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb20Q91XZ9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb20Q91XZ9 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb20Q91XZ9 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Pcdhb20Q91XZ9 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Pcdhb20Q91XZ9 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 32.5 ms