Protein–RNA interactions for Protein: Q8VIK3

H1foo, Histone H1oo, mousemouse

Predictions only

Length 304 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H1fooQ8VIK3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 H2af-ps-201ENSMUST00000119066 295 ntBASIC11.9□□□□□ -0.5
H1fooQ8VIK3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Gm43332-201ENSMUST00000202511 1044 ntBASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Gm45612-201ENSMUST00000211320 160 ntBASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.9□□□□□ -0.5
H1fooQ8VIK3 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
H1fooQ8VIK3 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC11.9□□□□□ -0.51
H1fooQ8VIK3 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC11.9□□□□□ -0.51
H1fooQ8VIK3 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.9□□□□□ -0.51
H1fooQ8VIK3 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Rprl2-201ENSMUST00000157150 290 ntBASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Ighv8-7-201ENSMUST00000194349 297 ntBASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Gm42802-201ENSMUST00000202475 456 ntTSL 2 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Lrrc26-201ENSMUST00000028337 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Gm28182-201ENSMUST00000188354 2477 ntBASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Mtdh-201ENSMUST00000022865 6919 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Sbf2-213ENSMUST00000171218 1476 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC11.89□□□□□ -0.51
H1fooQ8VIK3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Rgs9bp-201ENSMUST00000069912 6590 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gm11745-201ENSMUST00000121669 448 ntBASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gm43514-201ENSMUST00000198852 424 ntBASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 AC155252.2-201ENSMUST00000226946 680 ntBASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
H1fooQ8VIK3 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
Retrieved 100 of 76,532 protein–RNA pairs in 31.8 ms