Protein–RNA interactions for Protein: Q8R5L3

Vps39, Vam6/Vps39-like protein, mousemouse

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps39Q8R5L3 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Vps39Q8R5L3 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Nbeal2-210ENSMUST00000167320 8803 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gm18057-201ENSMUST00000208220 503 ntBASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gm26513-201ENSMUST00000181802 2489 ntBASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Nrn1-204ENSMUST00000224323 1779 ntBASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
Vps39Q8R5L3 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Pgm2-201ENSMUST00000058351 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Gm45612-201ENSMUST00000211320 160 ntBASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Vps39Q8R5L3 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Vps39Q8R5L3 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Gm14494-201ENSMUST00000118786 435 ntBASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Guca2b-201ENSMUST00000044426 605 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Vps39Q8R5L3 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms