Protein–RNA interactions for Protein: Q8R480

Nup85, Nuclear pore complex protein Nup85, mousemouse

Known RBP Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup85Q8R480 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup85Q8R480 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup85Q8R480 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup85Q8R480 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup85Q8R480 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Nup85Q8R480 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Nup85Q8R480 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Nup85Q8R480 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Gm27622-201ENSMUST00000183779 60 ntBASIC14.61□□□□□ -0.07
Nup85Q8R480 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC14.61□□□□□ -0.07
Nup85Q8R480 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.61□□□□□ -0.07
Nup85Q8R480 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
Nup85Q8R480 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.61□□□□□ -0.07
Nup85Q8R480 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Nup85Q8R480 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.6□□□□□ -0.07
Nup85Q8R480 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.6□□□□□ -0.07
Nup85Q8R480 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Nup85Q8R480 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 CT025610.1-201ENSMUST00000224552 1786 ntBASIC14.6□□□□□ -0.07
Nup85Q8R480 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nup85Q8R480 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.6□□□□□ -0.07
Nup85Q8R480 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.6□□□□□ -0.07
Nup85Q8R480 Gm18049-201ENSMUST00000208909 581 ntBASIC14.6□□□□□ -0.07
Nup85Q8R480 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.6□□□□□ -0.07
Nup85Q8R480 Gm13517-201ENSMUST00000120782 1495 ntBASIC14.6□□□□□ -0.07
Nup85Q8R480 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.6□□□□□ -0.07
Nup85Q8R480 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.6□□□□□ -0.07
Nup85Q8R480 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.6□□□□□ -0.07
Nup85Q8R480 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Nup85Q8R480 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.59□□□□□ -0.07
Nup85Q8R480 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.59□□□□□ -0.07
Nup85Q8R480 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Gm6415-201ENSMUST00000118488 348 ntBASIC14.59□□□□□ -0.07
Nup85Q8R480 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC14.59□□□□□ -0.07
Nup85Q8R480 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.59□□□□□ -0.07
Nup85Q8R480 Ighv8-7-201ENSMUST00000194349 297 ntBASIC14.59□□□□□ -0.07
Nup85Q8R480 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 AC159621.2-201ENSMUST00000223519 1326 ntBASIC14.59□□□□□ -0.07
Nup85Q8R480 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.59□□□□□ -0.07
Nup85Q8R480 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
Nup85Q8R480 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 43 ms