Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Gm18766-201ENSMUST00000189811 808 ntBASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Rfwd3Q8CIK8 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm29310-201ENSMUST00000185468 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21825-201ENSMUST00000185728 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm29109-201ENSMUST00000185895 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21896-201ENSMUST00000186520 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21873-201ENSMUST00000186728 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21794-201ENSMUST00000187056 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21880-201ENSMUST00000187275 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21826-201ENSMUST00000187451 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21198-201ENSMUST00000188393 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21749-201ENSMUST00000189343 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21901-201ENSMUST00000189568 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm29424-201ENSMUST00000189716 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm28599-201ENSMUST00000189838 694 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21867-201ENSMUST00000189917 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm29269-201ENSMUST00000190087 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21722-201ENSMUST00000190153 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm28423-201ENSMUST00000190701 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21899-201ENSMUST00000190745 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21910-201ENSMUST00000191163 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21849-201ENSMUST00000191571 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm28678-201ENSMUST00000191593 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm20910-201ENSMUST00000193268 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm21871-201ENSMUST00000194621 696 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm5779-201ENSMUST00000218467 910 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Rfwd3Q8CIK8 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Gm13823-201ENSMUST00000119930 345 ntBASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Gm25948-201ENSMUST00000175334 112 ntBASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 AC155729.1-201ENSMUST00000227758 544 ntBASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Map3k9-202ENSMUST00000222322 3303 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Rfwd3Q8CIK8 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 55 ms