Protein–RNA interactions for Protein: Q8CCF0

Prpf31, U4/U6 small nuclear ribonucleoprotein Prp31, mousemouse

Known RBP Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf31Q8CCF0 Grip2-205ENSMUST00000162300 5206 ntAPPRIS P2 TSL 5 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC15.51■□□□□ 0.07
Prpf31Q8CCF0 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Gm23547-201ENSMUST00000158210 271 ntBASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Gm45630-201ENSMUST00000210243 1911 ntBASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Prpf31Q8CCF0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Gm44645-201ENSMUST00000205492 1653 ntBASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Crybb3-203ENSMUST00000118226 892 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 AC153872.1-201ENSMUST00000199539 128 ntBASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 AC154806.6-201ENSMUST00000228192 202 ntBASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
Prpf31Q8CCF0 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 AC162938.1-201ENSMUST00000213140 2323 ntBASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Gm6473-201ENSMUST00000188572 1210 ntBASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 AC154846.1-201ENSMUST00000226278 862 ntBASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
Prpf31Q8CCF0 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms