Protein–RNA interactions for Protein: Q8C120

Sh3rf3, SH3 domain-containing RING finger protein 3, mousemouse

Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf3Q8C120 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Sh3rf3Q8C120 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Gm13823-201ENSMUST00000119930 345 ntBASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Sh3rf3Q8C120 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Gm25287-201ENSMUST00000103846 110 ntBASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Gm22918-201ENSMUST00000103855 110 ntBASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 AC149588.3-201ENSMUST00000227515 150 ntBASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Sh3rf3Q8C120 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm22065-201ENSMUST00000103753 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm22066-201ENSMUST00000103761 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm24932-201ENSMUST00000103763 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm24115-201ENSMUST00000103799 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm22190-201ENSMUST00000103827 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm22191-201ENSMUST00000103831 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm24721-201ENSMUST00000103849 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm28018-201ENSMUST00000103869 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm26399-201ENSMUST00000103937 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm25349-201ENSMUST00000177728 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm23616-201ENSMUST00000177797 110 ntBASIC14.78□□□□□ -0.04
Sh3rf3Q8C120 Gm25871-201ENSMUST00000177816 110 ntBASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 68.4 ms