Protein–RNA interactions for Protein: Q8BYH8

Chd9, Chromodomain-helicase-DNA-binding protein 9, mousemouse

Predictions only

Length 2,885 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd9Q8BYH8 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Gm45133-201ENSMUST00000207548 2773 ntBASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
Chd9Q8BYH8 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Rgs6-207ENSMUST00000186323 1308 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm12816-201ENSMUST00000118069 1212 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm4804-201ENSMUST00000182234 999 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm28215-201ENSMUST00000186146 346 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 AC192088.1-201ENSMUST00000227561 301 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm5879-201ENSMUST00000089501 1209 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Slc16a9-201ENSMUST00000046807 3756 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Klk6-203ENSMUST00000107968 1394 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Arf4os-201ENSMUST00000166902 566 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm37489-201ENSMUST00000191883 159 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm5425-201ENSMUST00000214125 459 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm18730-201ENSMUST00000218038 343 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 AC154806.6-201ENSMUST00000228192 202 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gng8-201ENSMUST00000078182 910 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm10313-201ENSMUST00000095320 1002 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Orai3-203ENSMUST00000121504 2141 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
Chd9Q8BYH8 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm5441-202ENSMUST00000190132 449 ntTSL 2 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Ighv1-25-201ENSMUST00000195638 345 ntBASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Cldnd2-201ENSMUST00000040227 664 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm10676-201ENSMUST00000098778 3221 ntBASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 4930583K01Rik-201ENSMUST00000138180 925 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm5276-201ENSMUST00000196683 1047 ntBASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm8598-201ENSMUST00000221184 836 ntBASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Capzb-201ENSMUST00000030518 1390 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm11839-201ENSMUST00000120647 1953 ntBASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Gm3756-201ENSMUST00000169182 1355 ntBASIC11.03□□□□□ -0.64
Chd9Q8BYH8 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Olfr286-202ENSMUST00000205305 969 ntBASIC11.02□□□□□ -0.64
Chd9Q8BYH8 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC11.02□□□□□ -0.64
Chd9Q8BYH8 Hebp2-201ENSMUST00000020000 2535 ntAPPRIS P1 TSL 1 (best) BASIC11.02□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms