Protein–RNA interactions for Protein: Q8BUM9

Usp43, Ubiquitin carboxyl-terminal hydrolase 43, mousemouse

Predictions only

Length 1,132 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp43Q8BUM9 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.39□□□□□ -0.11
Usp43Q8BUM9 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Smim4-202ENSMUST00000064032 791 ntTSL 3 BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Usp43Q8BUM9 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Gm14701-201ENSMUST00000117156 348 ntBASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Med11-202ENSMUST00000151013 445 ntTSL 2 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Gm16476-201ENSMUST00000221544 139 ntBASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Usp43Q8BUM9 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Aanat-205ENSMUST00000153476 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Gm12428-201ENSMUST00000119844 727 ntBASIC14.37□□□□□ -0.11
Usp43Q8BUM9 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Ighv1-15-201ENSMUST00000192077 351 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Dupd1-202ENSMUST00000224735 548 ntBASIC14.37□□□□□ -0.11
Usp43Q8BUM9 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.37□□□□□ -0.11
Usp43Q8BUM9 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Gm24543-201ENSMUST00000103867 82 ntBASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 AA543401-201ENSMUST00000164248 1269 ntBASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Usp43Q8BUM9 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 62.1 ms