Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Nup54Q8BTS4 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Nup54Q8BTS4 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Gm12585-201ENSMUST00000117307 290 ntBASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Gm15393-201ENSMUST00000120499 219 ntBASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Gm14719-201ENSMUST00000121891 340 ntBASIC14.52□□□□□ -0.09
Nup54Q8BTS4 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Alx4-201ENSMUST00000042078 5253 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Pcdh20-201ENSMUST00000061628 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Nup54Q8BTS4 Ldha-202ENSMUST00000048209 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.51□□□□□ -0.09
Nup54Q8BTS4 AC132863.2-201ENSMUST00000226643 799 ntBASIC14.51□□□□□ -0.09
Nup54Q8BTS4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Gm43697-201ENSMUST00000199637 2581 ntBASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Nup54Q8BTS4 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Gm21470-201ENSMUST00000187680 696 ntBASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.5□□□□□ -0.09
Nup54Q8BTS4 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
Nup54Q8BTS4 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC14.49□□□□□ -0.09
Nup54Q8BTS4 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.49□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms