Protein–RNA interactions for Protein: Q8BKX6

Smg1, Serine/threonine-protein kinase SMG1, mousemouse

Known RBP Predictions only

Length 3,658 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smg1Q8BKX6 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smg1Q8BKX6 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smg1Q8BKX6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.77□□□□□ -0.53
Smg1Q8BKX6 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Smg1Q8BKX6 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smg1Q8BKX6 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Smg1Q8BKX6 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm7467-201ENSMUST00000185173 652 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm9124-201ENSMUST00000191789 1092 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm9113-201ENSMUST00000192510 1018 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm9131-201ENSMUST00000193557 1089 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm9121-201ENSMUST00000193749 1071 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm45186-201ENSMUST00000206874 478 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Man1c1-201ENSMUST00000038628 4285 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm20426-201ENSMUST00000173657 440 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm44126-201ENSMUST00000204831 514 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Asna1-201ENSMUST00000064314 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm9856-201ENSMUST00000217077 2578 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm37297-201ENSMUST00000192974 2384 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Bach2os-201ENSMUST00000126225 1661 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Got2-ps1-201ENSMUST00000121655 1293 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Smg1Q8BKX6 Tle1-202ENSMUST00000072695 3644 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gm43509-201ENSMUST00000196551 2594 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gm26927-201ENSMUST00000182385 965 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gm14267-206ENSMUST00000226870 1209 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gm8862-201ENSMUST00000198379 1346 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gm37015-201ENSMUST00000192763 1521 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 AC153366.2-201ENSMUST00000219461 1984 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Mir1943-201ENSMUST00000158276 73 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gm42997-202ENSMUST00000200321 985 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 AC153974.2-201ENSMUST00000218577 1025 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Gm42471-201ENSMUST00000201457 1865 ntBASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Epb41l5-201ENSMUST00000027632 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
Smg1Q8BKX6 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Ptges3l-203ENSMUST00000107252 853 ntAPPRIS ALT2 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Gm43058-201ENSMUST00000197645 625 ntBASIC11.74□□□□□ -0.53
Smg1Q8BKX6 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 4930479H17Rik-201ENSMUST00000208824 292 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.74□□□□□ -0.53
Smg1Q8BKX6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC11.74□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms