Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Chmp2bQ8BJF9 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Gm15483-201ENSMUST00000120338 456 ntBASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Gm45747-201ENSMUST00000212203 999 ntBASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 2010003K11Rik-201ENSMUST00000048482 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Fam26f-201ENSMUST00000062784 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Gm13410-201ENSMUST00000117058 1415 ntBASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Chmp2bQ8BJF9 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Aimp2-202ENSMUST00000100483 1073 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Dlk1-203ENSMUST00000109842 1129 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Gm8584-201ENSMUST00000171982 758 ntBASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Gm17968-201ENSMUST00000194902 784 ntBASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Aimp2-201ENSMUST00000031613 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Fam19a2-201ENSMUST00000050756 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
Chmp2bQ8BJF9 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Nt5c-202ENSMUST00000106530 836 ntTSL 3 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Gm28308-201ENSMUST00000128102 752 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Gm7229-201ENSMUST00000214719 1007 ntBASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
Chmp2bQ8BJF9 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms