Protein–RNA interactions for Protein: Q810I2

Trim50, E3 ubiquitin-protein ligase TRIM50, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim50Q810I2 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim50Q810I2 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim50Q810I2 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trim50Q810I2 Sema4b-204ENSMUST00000205822 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Ush1g-201ENSMUST00000103037 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim50Q810I2 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.85□□□□□ -0.19
Trim50Q810I2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trim50Q810I2 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Gm18766-201ENSMUST00000189811 808 ntBASIC13.85□□□□□ -0.19
Trim50Q810I2 Gm10253-201ENSMUST00000194270 940 ntBASIC13.85□□□□□ -0.19
Trim50Q810I2 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.85□□□□□ -0.19
Trim50Q810I2 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.85□□□□□ -0.19
Trim50Q810I2 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.85□□□□□ -0.19
Trim50Q810I2 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Hoxd3-203ENSMUST00000111983 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trim50Q810I2 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.85□□□□□ -0.19
Trim50Q810I2 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim50Q810I2 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim50Q810I2 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.84□□□□□ -0.19
Trim50Q810I2 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trim50Q810I2 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC13.84□□□□□ -0.19
Trim50Q810I2 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Trim50Q810I2 Gm6222-201ENSMUST00000120787 396 ntBASIC13.84□□□□□ -0.19
Trim50Q810I2 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.84□□□□□ -0.19
Trim50Q810I2 Gm7774-201ENSMUST00000200064 533 ntBASIC13.84□□□□□ -0.19
Trim50Q810I2 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim50Q810I2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trim50Q810I2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Plod2-203ENSMUST00000160359 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trim50Q810I2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim50Q810I2 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Trim50Q810I2 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim50Q810I2 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trim50Q810I2 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.83□□□□□ -0.2
Trim50Q810I2 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Trim50Q810I2 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.83□□□□□ -0.2
Trim50Q810I2 Mir449b-201ENSMUST00000104833 80 ntBASIC13.83□□□□□ -0.2
Trim50Q810I2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.83□□□□□ -0.2
Trim50Q810I2 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trim50Q810I2 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.83□□□□□ -0.2
Trim50Q810I2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Gm5779-201ENSMUST00000218467 910 ntBASIC13.83□□□□□ -0.2
Trim50Q810I2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Krtap9-3-201ENSMUST00000062683 759 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Trim50Q810I2 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Nap1l1-208ENSMUST00000219961 1512 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trim50Q810I2 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Trim50Q810I2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.82□□□□□ -0.2
Trim50Q810I2 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms