Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Gm13829-201ENSMUST00000119600 138 ntBASIC15.53■□□□□ 0.08
Ush1gQ80T11 Gm21854-201ENSMUST00000179901 471 ntBASIC15.53■□□□□ 0.08
Ush1gQ80T11 AA619741-201ENSMUST00000195095 646 ntBASIC15.53■□□□□ 0.08
Ush1gQ80T11 Gm44719-201ENSMUST00000206404 149 ntBASIC15.53■□□□□ 0.08
Ush1gQ80T11 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
Ush1gQ80T11 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
Ush1gQ80T11 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ush1gQ80T11 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Loxl2-201ENSMUST00000022660 5316 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC15.52■□□□□ 0.08
Ush1gQ80T11 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 AC155286.1-201ENSMUST00000218632 448 ntBASIC15.52■□□□□ 0.08
Ush1gQ80T11 AC124510.1-201ENSMUST00000222659 583 ntTSL 5 BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC15.52■□□□□ 0.08
Ush1gQ80T11 Mir125a-201ENSMUST00000083545 68 ntBASIC15.52■□□□□ 0.08
Ush1gQ80T11 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Krt20-201ENSMUST00000017743 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.52■□□□□ 0.07
Ush1gQ80T11 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Adamts7-201ENSMUST00000113059 5379 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Fbxl12-205ENSMUST00000140702 1555 ntBASIC15.51■□□□□ 0.07
Ush1gQ80T11 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Gm15806-201ENSMUST00000120696 955 ntBASIC15.51■□□□□ 0.07
Ush1gQ80T11 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Gm10766-202ENSMUST00000194123 606 ntBASIC15.51■□□□□ 0.07
Ush1gQ80T11 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Gm45133-201ENSMUST00000207548 2773 ntBASIC15.51■□□□□ 0.07
Ush1gQ80T11 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
Ush1gQ80T11 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.5■□□□□ 0.07
Ush1gQ80T11 Mir6392-201ENSMUST00000184924 108 ntBASIC15.5■□□□□ 0.07
Retrieved 100 of 76,532 protein–RNA pairs in 47.6 ms