Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Net1-207ENSMUST00000223258 597 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Ddx55Q6ZPL9 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Gm4971-201ENSMUST00000205991 1108 ntBASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Ssr1-204ENSMUST00000225319 1610 ntBASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.04■□□□□ 0.16
Ddx55Q6ZPL9 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 AC168058.1-201ENSMUST00000219521 2282 ntBASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Zdhhc4-208ENSMUST00000161915 1216 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 CU024892.2-201ENSMUST00000224608 832 ntBASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Ddx55Q6ZPL9 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Gm7172-201ENSMUST00000218047 1152 ntBASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Ddx55Q6ZPL9 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Gm13859-201ENSMUST00000119936 1423 ntBASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Ddx55Q6ZPL9 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC16.01■□□□□ 0.15
Ddx55Q6ZPL9 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms