Protein–RNA interactions for Protein: Q6PE01

Snrnp40, U5 small nuclear ribonucleoprotein 40 kDa protein, mousemouse

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snrnp40Q6PE01 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Ier5-201ENSMUST00000055322 3276 ntAPPRIS P1 BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Snrnp40Q6PE01 Kitl-202ENSMUST00000105283 5648 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Fam102a-201ENSMUST00000048375 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Ldha-214ENSMUST00000210815 1535 ntTSL 5 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm13689-201ENSMUST00000119360 685 ntBASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm13385-201ENSMUST00000121089 220 ntBASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm26464-201ENSMUST00000157094 305 ntBASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm27572-201ENSMUST00000183702 255 ntBASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
Snrnp40Q6PE01 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Zmynd11-204ENSMUST00000110635 3881 ntTSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm11557-201ENSMUST00000120200 1008 ntBASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm42420-201ENSMUST00000126621 634 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm8927-201ENSMUST00000181978 981 ntBASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm42442-201ENSMUST00000197951 1133 ntBASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm43240-201ENSMUST00000198543 630 ntTSL 3 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm43179-201ENSMUST00000198797 275 ntBASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm38671-201ENSMUST00000200573 130 ntBASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm3222-201ENSMUST00000071282 990 ntBASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Snrnp40Q6PE01 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 St6galnac6-209ENSMUST00000131229 1013 ntTSL 2 BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Snrnp40Q6PE01 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 25.3 ms