Protein–RNA interactions for Protein: Q61572

Foxc1, Forkhead box protein C1, mousemouse

Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxc1Q61572 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC10.54□□□□□ -0.72
Foxc1Q61572 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Tatdn2-205ENSMUST00000204753 2645 ntAPPRIS ALT2 TSL 1 (best) BASIC10.54□□□□□ -0.72
Foxc1Q61572 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Gm43195-201ENSMUST00000200614 2332 ntBASIC10.53□□□□□ -0.72
Foxc1Q61572 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Ntf3-202ENSMUST00000112244 1399 ntAPPRIS ALT1 TSL 3 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Gm13332-201ENSMUST00000120451 1398 ntBASIC10.53□□□□□ -0.72
Foxc1Q61572 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC10.53□□□□□ -0.72
Foxc1Q61572 BC037039-201ENSMUST00000192003 2205 ntBASIC10.53□□□□□ -0.72
Foxc1Q61572 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Gm15968-201ENSMUST00000119342 1168 ntBASIC10.53□□□□□ -0.72
Foxc1Q61572 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Arid2-202ENSMUST00000134985 809 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 AA543401-201ENSMUST00000164248 1269 ntBASIC10.53□□□□□ -0.72
Foxc1Q61572 Rpf2-206ENSMUST00000183309 1296 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 1700003C15Rik-202ENSMUST00000188236 710 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 AC156801.1-201ENSMUST00000216158 493 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Gm5628-201ENSMUST00000222318 1049 ntBASIC10.53□□□□□ -0.72
Foxc1Q61572 Gm40383-201ENSMUST00000222601 610 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 CT030684.1-201ENSMUST00000227292 914 ntBASIC10.53□□□□□ -0.72
Foxc1Q61572 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC10.53□□□□□ -0.72
Foxc1Q61572 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 CT030684.3-201ENSMUST00000227308 2445 ntBASIC10.53□□□□□ -0.72
Foxc1Q61572 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.53□□□□□ -0.72
Foxc1Q61572 Mmp28-203ENSMUST00000108137 2451 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Foxc1Q61572 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 AC167013.2-201ENSMUST00000228520 2684 ntBASIC10.52□□□□□ -0.72
Foxc1Q61572 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.72
Foxc1Q61572 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Foxc1Q61572 Gm43435-201ENSMUST00000199996 1438 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm13365-201ENSMUST00000121188 973 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Rbm48-202ENSMUST00000121877 617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Rps10-ps2-201ENSMUST00000127484 496 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm23757-201ENSMUST00000158353 100 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Zdhhc23-202ENSMUST00000165648 1278 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm6944-201ENSMUST00000182449 1006 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm43244-201ENSMUST00000196994 1285 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm43125-201ENSMUST00000201724 730 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm18057-201ENSMUST00000208220 503 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Tpt1-ps4-201ENSMUST00000210908 503 ntBASIC10.52□□□□□ -0.73
Foxc1Q61572 Gm39375-201ENSMUST00000217068 1039 ntTSL 5 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC10.52□□□□□ -0.73
Foxc1Q61572 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms