Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 1700021F07Rik-201ENSMUST00000029023 646 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC12.22□□□□□ -0.45
Trav5d-4Q5R1F6 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 AC225888.1-201ENSMUST00000227184 728 ntBASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
Trav5d-4Q5R1F6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.46
Trav5d-4Q5R1F6 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC12.21□□□□□ -0.46
Trav5d-4Q5R1F6 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.46
Trav5d-4Q5R1F6 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5d-4Q5R1F6 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5d-4Q5R1F6 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5d-4Q5R1F6 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5d-4Q5R1F6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.46
Trav5d-4Q5R1F6 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Klk6-202ENSMUST00000107967 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Gm44123-201ENSMUST00000204662 577 ntTSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Trav5d-4Q5R1F6 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.19□□□□□ -0.46
Trav5d-4Q5R1F6 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms