Protein–RNA interactions for Protein: Q5DTM8

Rnf20, E3 ubiquitin-protein ligase BRE1A, mousemouse

Predictions only

Length 973 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf20Q5DTM8 Gm27359-201ENSMUST00000184153 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm27785-201ENSMUST00000184268 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm27466-201ENSMUST00000184396 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm27703-201ENSMUST00000184836 110 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm29019-202ENSMUST00000188623 564 ntTSL 2 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 AC151286.1-201ENSMUST00000198489 145 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Chchd1-203ENSMUST00000224633 557 ntBASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
Rnf20Q5DTM8 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Park7-205ENSMUST00000105676 582 ntTSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Gm24158-201ENSMUST00000175263 71 ntBASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Gm44608-201ENSMUST00000206827 855 ntBASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
Rnf20Q5DTM8 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
Rnf20Q5DTM8 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf20Q5DTM8 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
Rnf20Q5DTM8 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Gm6736-201ENSMUST00000166583 948 ntBASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Gm43073-201ENSMUST00000198200 1189 ntBASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
Rnf20Q5DTM8 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 AC121801.1-201ENSMUST00000225363 1899 ntBASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
Rnf20Q5DTM8 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms