Protein–RNA interactions for Protein: Q3V036

Ccdc27, Coiled-coil domain-containing protein 27, mousemouse

Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc27Q3V036 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Gsg1l-201ENSMUST00000073935 3923 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Ccdc27Q3V036 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Clec11a-201ENSMUST00000004587 2978 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
Ccdc27Q3V036 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 AC117194.1-201ENSMUST00000224847 3002 ntBASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Gm5177-201ENSMUST00000183092 997 ntBASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Thap2-203ENSMUST00000218989 527 ntBASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
Ccdc27Q3V036 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Gm45638-201ENSMUST00000211507 2878 ntBASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Ccdc27Q3V036 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Grk6-205ENSMUST00000224653 2976 ntBASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Gm1401-201ENSMUST00000122048 772 ntBASIC18.09■□□□□ 0.49
Ccdc27Q3V036 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
Ccdc27Q3V036 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms