Protein–RNA interactions for Protein: Q3US17

Znf48, Zinc finger protein 48, mousemouse

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Znf48Q3US17 Eif2b1-201ENSMUST00000031334 2013 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Asf1b-201ENSMUST00000005607 1788 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Znf48Q3US17 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Znf48Q3US17 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC11.83□□□□□ -0.52
Znf48Q3US17 Gm16198-201ENSMUST00000118766 670 ntBASIC11.83□□□□□ -0.52
Znf48Q3US17 Gm15063-201ENSMUST00000152648 895 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.83□□□□□ -0.52
Znf48Q3US17 Gm37277-201ENSMUST00000194052 1111 ntBASIC11.83□□□□□ -0.52
Znf48Q3US17 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.83□□□□□ -0.52
Znf48Q3US17 AC131710.1-201ENSMUST00000228336 990 ntBASIC11.83□□□□□ -0.52
Znf48Q3US17 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Gm2423-201ENSMUST00000074863 733 ntBASIC11.83□□□□□ -0.52
Znf48Q3US17 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC11.83□□□□□ -0.52
Znf48Q3US17 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Msantd2-204ENSMUST00000211060 2165 ntTSL 3 BASIC11.83□□□□□ -0.52
Znf48Q3US17 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Letmd1-201ENSMUST00000037001 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Znf48Q3US17 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC11.83□□□□□ -0.52
Znf48Q3US17 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Znf48Q3US17 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.82□□□□□ -0.52
Znf48Q3US17 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Gm14667-201ENSMUST00000119448 1350 ntBASIC11.82□□□□□ -0.52
Znf48Q3US17 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Gnat3-201ENSMUST00000030561 1361 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Znf48Q3US17 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.82□□□□□ -0.52
Znf48Q3US17 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.82□□□□□ -0.52
Znf48Q3US17 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC11.82□□□□□ -0.52
Znf48Q3US17 9030204H09Rik-201ENSMUST00000139455 653 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Gm26771-201ENSMUST00000180472 1082 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 4930412E21Rik-201ENSMUST00000194267 778 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Gtpbp10-211ENSMUST00000198799 648 ntBASIC11.82□□□□□ -0.52
Znf48Q3US17 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC11.82□□□□□ -0.52
Znf48Q3US17 B230112I24Rik-201ENSMUST00000203953 1229 ntBASIC11.82□□□□□ -0.52
Znf48Q3US17 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC11.82□□□□□ -0.52
Znf48Q3US17 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC11.82□□□□□ -0.52
Znf48Q3US17 Gzma-201ENSMUST00000023897 878 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 AC131104.1-201ENSMUST00000222118 1739 ntTSL 5 BASIC11.82□□□□□ -0.52
Znf48Q3US17 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Znf48Q3US17 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC11.82□□□□□ -0.52
Znf48Q3US17 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC11.82□□□□□ -0.52
Znf48Q3US17 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Magi1-206ENSMUST00000203688 4969 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Znf48Q3US17 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Znf48Q3US17 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Acot6-202ENSMUST00000222921 3622 ntBASIC11.81□□□□□ -0.52
Znf48Q3US17 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Sigirr-201ENSMUST00000097958 1990 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC11.81□□□□□ -0.52
Znf48Q3US17 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Denr-201ENSMUST00000023869 2339 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Hmgn1-201ENSMUST00000050884 2174 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Znf48Q3US17 Ppil1-201ENSMUST00000024802 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Znf48Q3US17 Gm25287-201ENSMUST00000103846 110 ntBASIC11.81□□□□□ -0.52
Znf48Q3US17 Gm22918-201ENSMUST00000103855 110 ntBASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms