Protein–RNA interactions for Protein: Q3UP44

Nhlrc4, NHL-repeat-containing protein 4, mousemouse

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nhlrc4Q3UP44 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Ano7-201ENSMUST00000058682 2963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Nhlrc4Q3UP44 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Gm5320-201ENSMUST00000207163 1519 ntBASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Gm14767-201ENSMUST00000121559 586 ntBASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Cd63-ps-201ENSMUST00000145417 875 ntBASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Gm7775-201ENSMUST00000218871 853 ntBASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Gm9063-201ENSMUST00000223299 582 ntBASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Dhdds-204ENSMUST00000105887 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Nhlrc4Q3UP44 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Nhlrc4Q3UP44 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Gm9229-201ENSMUST00000222777 126 ntBASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Nhlrc4Q3UP44 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms