Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Paupar-201ENSMUST00000194826 3482 ntBASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Als2cl-203ENSMUST00000130386 5056 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Ntng1-203ENSMUST00000106570 1386 ntTSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Zmynd8-203ENSMUST00000099084 5232 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Slit2-216ENSMUST00000174313 7734 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Surf1-201ENSMUST00000015934 1173 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Gm43767-201ENSMUST00000198933 381 ntBASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Myo18a-205ENSMUST00000100794 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Scn10a-201ENSMUST00000084787 6416 ntAPPRIS P2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Lipe-208ENSMUST00000206861 3171 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Ppp1r16b-202ENSMUST00000052927 6685 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Brwd1-204ENSMUST00000113829 9843 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Frmpd1-202ENSMUST00000107804 5241 ntAPPRIS P1 TSL 5 BASIC10.19□□□□□ -0.78
Cks1brtQ3UNC9 Camk2d-216ENSMUST00000163226 4204 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Gm10305-201ENSMUST00000195331 2475 ntBASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Pcdhga3-201ENSMUST00000073447 4720 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Ccl27a-202ENSMUST00000108032 350 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Zfp930-203ENSMUST00000212312 493 ntTSL 2 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Fhdc1-202ENSMUST00000107689 5918 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Socs6-201ENSMUST00000070116 6036 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Gm6211-201ENSMUST00000147973 4275 ntBASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
Cks1brtQ3UNC9 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Acvr1c-204ENSMUST00000112608 1497 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Gm20632-201ENSMUST00000176760 2427 ntBASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Tcf25-203ENSMUST00000211932 5002 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Gm4081-201ENSMUST00000195287 1838 ntBASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Gm15295-201ENSMUST00000139874 488 ntTSL 5 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Fhad1os2-201ENSMUST00000152351 945 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 AC117588.1-201ENSMUST00000228510 999 ntBASIC10.17□□□□□ -0.78
Cks1brtQ3UNC9 A930018P22Rik-201ENSMUST00000040374 822 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
Retrieved 100 of 76,532 protein–RNA pairs in 50.7 ms