Protein–RNA interactions for Protein: P97801

Smn1, Survival motor neuron protein, mousemouse

Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smn1P97801 Caprin1-201ENSMUST00000028607 6169 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smn1P97801 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC12.18□□□□□ -0.46
Smn1P97801 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC12.18□□□□□ -0.46
Smn1P97801 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Gm6184-201ENSMUST00000120403 1261 ntBASIC12.18□□□□□ -0.46
Smn1P97801 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC12.18□□□□□ -0.46
Smn1P97801 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC12.18□□□□□ -0.46
Smn1P97801 Zfp810-203ENSMUST00000215202 822 ntTSL 3 BASIC12.18□□□□□ -0.46
Smn1P97801 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC12.18□□□□□ -0.46
Smn1P97801 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Smn1P97801 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.18□□□□□ -0.46
Smn1P97801 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC12.18□□□□□ -0.46
Smn1P97801 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC12.18□□□□□ -0.46
Smn1P97801 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC12.18□□□□□ -0.46
Smn1P97801 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Smn1P97801 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.18□□□□□ -0.46
Smn1P97801 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.18□□□□□ -0.46
Smn1P97801 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smn1P97801 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smn1P97801 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC12.17□□□□□ -0.46
Smn1P97801 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smn1P97801 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
Smn1P97801 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Tpt1-201ENSMUST00000110894 1169 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smn1P97801 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.17□□□□□ -0.46
Smn1P97801 Gm9182-201ENSMUST00000217829 639 ntBASIC12.17□□□□□ -0.46
Smn1P97801 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.17□□□□□ -0.46
Smn1P97801 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Smn1P97801 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC12.17□□□□□ -0.46
Smn1P97801 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Smn1P97801 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.17□□□□□ -0.46
Smn1P97801 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Smn1P97801 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 D330025C20Rik-201ENSMUST00000191632 3046 ntBASIC12.16□□□□□ -0.46
Smn1P97801 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC12.16□□□□□ -0.46
Smn1P97801 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC12.16□□□□□ -0.46
Smn1P97801 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Smn1P97801 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.16□□□□□ -0.46
Smn1P97801 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC12.16□□□□□ -0.46
Smn1P97801 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC12.16□□□□□ -0.46
Smn1P97801 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC12.16□□□□□ -0.46
Smn1P97801 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Smn1P97801 Urah-207ENSMUST00000211372 688 ntAPPRIS P3 TSL 2 BASIC12.16□□□□□ -0.46
Smn1P97801 AV026068-213ENSMUST00000223675 1171 ntBASIC12.16□□□□□ -0.46
Smn1P97801 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.16□□□□□ -0.46
Smn1P97801 Urah-201ENSMUST00000026554 890 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC12.16□□□□□ -0.46
Smn1P97801 Isg15-201ENSMUST00000085425 756 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC12.16□□□□□ -0.46
Smn1P97801 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.16□□□□□ -0.46
Smn1P97801 Grk6-205ENSMUST00000224653 2976 ntBASIC12.16□□□□□ -0.46
Smn1P97801 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Smn1P97801 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Smn1P97801 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms