Protein–RNA interactions for Protein: P82349

Sgcb, Beta-sarcoglycan, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SgcbP82349 Gm38294-201ENSMUST00000192831 381 ntBASIC12.67□□□□□ -0.38
SgcbP82349 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC12.67□□□□□ -0.38
SgcbP82349 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.67□□□□□ -0.38
SgcbP82349 AC121598.1-201ENSMUST00000228224 1019 ntBASIC12.67□□□□□ -0.38
SgcbP82349 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
SgcbP82349 Mir125a-201ENSMUST00000083545 68 ntBASIC12.67□□□□□ -0.38
SgcbP82349 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.67□□□□□ -0.38
SgcbP82349 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
SgcbP82349 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Grhl2-203ENSMUST00000161405 1996 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SgcbP82349 Zfp879-201ENSMUST00000049625 2408 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
SgcbP82349 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
SgcbP82349 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.66□□□□□ -0.38
SgcbP82349 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Gm45751-201ENSMUST00000210185 1573 ntBASIC12.66□□□□□ -0.38
SgcbP82349 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SgcbP82349 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC12.66□□□□□ -0.38
SgcbP82349 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.66□□□□□ -0.38
SgcbP82349 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Mir7023-201ENSMUST00000185093 64 ntBASIC12.66□□□□□ -0.38
SgcbP82349 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Dupd1-202ENSMUST00000224735 548 ntBASIC12.66□□□□□ -0.38
SgcbP82349 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
SgcbP82349 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
SgcbP82349 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
SgcbP82349 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
SgcbP82349 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Tfeb-201ENSMUST00000024786 2296 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Tbx15-201ENSMUST00000029462 3566 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SgcbP82349 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Dnajb12-201ENSMUST00000020309 2238 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.65□□□□□ -0.38
SgcbP82349 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
SgcbP82349 Gm13306-202ENSMUST00000108018 542 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Gm15653-201ENSMUST00000119247 907 ntBASIC12.65□□□□□ -0.38
SgcbP82349 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
SgcbP82349 Auts2-212ENSMUST00000178555 309 ntBASIC12.65□□□□□ -0.38
SgcbP82349 Gm28237-202ENSMUST00000189477 748 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Gm44344-201ENSMUST00000200287 129 ntBASIC12.65□□□□□ -0.38
SgcbP82349 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 AC121804.3-201ENSMUST00000223420 295 ntBASIC12.65□□□□□ -0.38
SgcbP82349 Shd-206ENSMUST00000225145 998 ntBASIC12.65□□□□□ -0.38
SgcbP82349 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
SgcbP82349 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SgcbP82349 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
SgcbP82349 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
SgcbP82349 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 43.7 ms