Protein–RNA interactions for Protein: P70178

Six5, Homeobox protein SIX5, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six5P70178 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Six5P70178 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six5P70178 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Six5P70178 Pard3-202ENSMUST00000079777 3394 ntTSL 5 BASIC13.31□□□□□ -0.28
Six5P70178 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Six5P70178 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Six5P70178 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
Six5P70178 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Ksr1-207ENSMUST00000226282 5260 ntBASIC13.3□□□□□ -0.28
Six5P70178 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Six5P70178 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Six5P70178 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
Six5P70178 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Commd6-201ENSMUST00000100339 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.3□□□□□ -0.28
Six5P70178 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.3□□□□□ -0.28
Six5P70178 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.3□□□□□ -0.28
Six5P70178 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Six5P70178 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Six5P70178 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Six5P70178 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Six5P70178 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Adam23-205ENSMUST00000114107 6110 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Six5P70178 Gm25144-201ENSMUST00000179561 110 ntBASIC13.29□□□□□ -0.28
Six5P70178 Gm25352-201ENSMUST00000179815 110 ntBASIC13.29□□□□□ -0.28
Six5P70178 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.29□□□□□ -0.28
Six5P70178 Gm27430-201ENSMUST00000184585 107 ntBASIC13.29□□□□□ -0.28
Six5P70178 Gm44333-201ENSMUST00000197168 107 ntBASIC13.29□□□□□ -0.28
Six5P70178 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Gm5779-201ENSMUST00000218467 910 ntBASIC13.29□□□□□ -0.28
Six5P70178 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.29□□□□□ -0.28
Six5P70178 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Gm43697-201ENSMUST00000199637 2581 ntBASIC13.29□□□□□ -0.28
Six5P70178 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.29□□□□□ -0.28
Six5P70178 Cep170-205ENSMUST00000192961 2708 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Six5P70178 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Six5P70178 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Six5P70178 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Six5P70178 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Six5P70178 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms