Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SqleP52019 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
SqleP52019 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
SqleP52019 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Prob1-201ENSMUST00000097619 3021 ntBASIC15.3■□□□□ 0.04
SqleP52019 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SqleP52019 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Gm12241-201ENSMUST00000118330 726 ntBASIC15.3■□□□□ 0.04
SqleP52019 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
SqleP52019 Gm10156-201ENSMUST00000122364 462 ntBASIC15.3■□□□□ 0.04
SqleP52019 Gm6152-201ENSMUST00000151704 340 ntBASIC15.3■□□□□ 0.04
SqleP52019 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC15.3■□□□□ 0.04
SqleP52019 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC15.3■□□□□ 0.04
SqleP52019 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC15.3■□□□□ 0.04
SqleP52019 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Gm45865-201ENSMUST00000211815 945 ntBASIC15.3■□□□□ 0.04
SqleP52019 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
SqleP52019 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
SqleP52019 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC15.29■□□□□ 0.04
SqleP52019 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 App-207ENSMUST00000227737 2827 ntBASIC15.29■□□□□ 0.04
SqleP52019 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC15.29■□□□□ 0.04
SqleP52019 Gm11793-201ENSMUST00000120433 981 ntBASIC15.29■□□□□ 0.04
SqleP52019 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Gm14966-202ENSMUST00000129675 649 ntTSL 2 BASIC15.29■□□□□ 0.04
SqleP52019 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC15.29■□□□□ 0.04
SqleP52019 Gm27320-201ENSMUST00000184892 109 ntBASIC15.29■□□□□ 0.04
SqleP52019 Gm43133-201ENSMUST00000197472 463 ntBASIC15.29■□□□□ 0.04
SqleP52019 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 AC164573.1-201ENSMUST00000218616 963 ntTSL 5 BASIC15.29■□□□□ 0.04
SqleP52019 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Olfr686-201ENSMUST00000050157 1018 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SqleP52019 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC15.29■□□□□ 0.04
SqleP52019 Zfp36l3-201ENSMUST00000071711 2347 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
SqleP52019 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
SqleP52019 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.29■□□□□ 0.04
SqleP52019 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Ace-201ENSMUST00000001963 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
SqleP52019 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC15.28■□□□□ 0.04
SqleP52019 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC15.28■□□□□ 0.04
SqleP52019 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC15.28■□□□□ 0.04
SqleP52019 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Ppih-203ENSMUST00000106318 800 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
SqleP52019 Gm11723-201ENSMUST00000155505 466 ntTSL 3 BASIC15.28■□□□□ 0.04
SqleP52019 Gm13115-201ENSMUST00000156438 620 ntTSL 5 BASIC15.28■□□□□ 0.04
SqleP52019 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC15.28■□□□□ 0.04
SqleP52019 Gm4271-201ENSMUST00000174444 973 ntBASIC15.28■□□□□ 0.04
SqleP52019 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.28■□□□□ 0.04
SqleP52019 Olfr284-202ENSMUST00000206647 966 ntBASIC15.28■□□□□ 0.04
SqleP52019 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 AC139350.3-201ENSMUST00000226151 420 ntBASIC15.28■□□□□ 0.04
SqleP52019 Bphl-201ENSMUST00000040656 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Snora73a-201ENSMUST00000082453 205 ntBASIC15.28■□□□□ 0.04
SqleP52019 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
SqleP52019 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
SqleP52019 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 61.4 ms