Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
RoraP51448 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
RoraP51448 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RoraP51448 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC13.44□□□□□ -0.26
RoraP51448 Gm5186-201ENSMUST00000218781 920 ntBASIC13.44□□□□□ -0.26
RoraP51448 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
RoraP51448 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
RoraP51448 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.44□□□□□ -0.26
RoraP51448 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
RoraP51448 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC13.44□□□□□ -0.26
RoraP51448 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RoraP51448 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC13.44□□□□□ -0.26
RoraP51448 Rnf138-201ENSMUST00000052396 3110 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
RoraP51448 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
RoraP51448 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Gm14042-201ENSMUST00000120139 833 ntBASIC13.43□□□□□ -0.26
RoraP51448 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Gtf2e2-201ENSMUST00000167264 1566 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.43□□□□□ -0.26
RoraP51448 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 AC135669.1-201ENSMUST00000213585 412 ntBASIC13.43□□□□□ -0.26
RoraP51448 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RoraP51448 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.43□□□□□ -0.26
RoraP51448 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
RoraP51448 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Nup54-201ENSMUST00000038514 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Acss1-201ENSMUST00000028944 3618 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
RoraP51448 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
RoraP51448 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
RoraP51448 Gm26793-201ENSMUST00000180930 2732 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
RoraP51448 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.42□□□□□ -0.26
RoraP51448 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC13.42□□□□□ -0.26
RoraP51448 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.42□□□□□ -0.26
RoraP51448 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Hist1h2al-201ENSMUST00000091708 339 ntBASIC13.42□□□□□ -0.26
RoraP51448 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.42□□□□□ -0.26
RoraP51448 Epha2-201ENSMUST00000006614 3913 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.42□□□□□ -0.26
RoraP51448 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC13.42□□□□□ -0.26
RoraP51448 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
RoraP51448 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
RoraP51448 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
RoraP51448 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RoraP51448 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RoraP51448 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
RoraP51448 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RoraP51448 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RoraP51448 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
RoraP51448 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC13.41□□□□□ -0.26
RoraP51448 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RoraP51448 Gm13994-201ENSMUST00000137397 513 ntTSL 5 BASIC13.41□□□□□ -0.26
RoraP51448 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.41□□□□□ -0.26
RoraP51448 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
RoraP51448 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC13.41□□□□□ -0.26
RoraP51448 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC13.41□□□□□ -0.26
RoraP51448 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.41□□□□□ -0.26
RoraP51448 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
RoraP51448 Gm20445-201ENSMUST00000061905 565 ntBASIC13.41□□□□□ -0.26
RoraP51448 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.41□□□□□ -0.26
RoraP51448 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RoraP51448 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
RoraP51448 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.41□□□□□ -0.26
RoraP51448 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
RoraP51448 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms