Protein–RNA interactions for Protein: P50481

Lhx3, LIM/homeobox protein Lhx3, mousemouse

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lhx3P50481 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 S100b-201ENSMUST00000036387 1484 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC14.36□□□□□ -0.11
Lhx3P50481 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Lhx3P50481 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Lhx3P50481 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC14.35□□□□□ -0.11
Lhx3P50481 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Lhx3P50481 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC14.35□□□□□ -0.11
Lhx3P50481 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Lhx3P50481 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.35□□□□□ -0.11
Lhx3P50481 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC14.35□□□□□ -0.11
Lhx3P50481 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.35□□□□□ -0.11
Lhx3P50481 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Lhx3P50481 Olfr1410-201ENSMUST00000079790 969 ntTSL 5 BASIC14.35□□□□□ -0.11
Lhx3P50481 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.35□□□□□ -0.11
Lhx3P50481 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Trp73-201ENSMUST00000097762 2205 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC14.35□□□□□ -0.11
Lhx3P50481 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Lhx3P50481 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Lhx3P50481 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 AC114543.1-201ENSMUST00000226451 1558 ntBASIC14.34□□□□□ -0.11
Lhx3P50481 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Gm10676-201ENSMUST00000098778 3221 ntBASIC14.34□□□□□ -0.11
Lhx3P50481 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 AC159196.2-201ENSMUST00000224082 1622 ntBASIC14.34□□□□□ -0.11
Lhx3P50481 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC14.34□□□□□ -0.11
Lhx3P50481 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Gm21854-201ENSMUST00000179901 471 ntBASIC14.34□□□□□ -0.11
Lhx3P50481 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Gm7730-201ENSMUST00000212486 454 ntBASIC14.34□□□□□ -0.11
Lhx3P50481 AC124732.1-201ENSMUST00000221551 910 ntBASIC14.34□□□□□ -0.11
Lhx3P50481 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Gm2423-201ENSMUST00000074863 733 ntBASIC14.34□□□□□ -0.11
Lhx3P50481 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Lhx3P50481 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Lhx3P50481 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx3P50481 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx3P50481 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx3P50481 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Lhx3P50481 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx3P50481 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Lhx3P50481 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
Lhx3P50481 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.33□□□□□ -0.12
Lhx3P50481 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx3P50481 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Lhx3P50481 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx3P50481 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Lhx3P50481 Gm22189-201ENSMUST00000103822 86 ntBASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 149.7 ms