Protein–RNA interactions for Protein: P48437

Prox1, Prospero homeobox protein 1, mousemouse

Predictions only

Length 737 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prox1P48437 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.64□□□□□ -0.23
Prox1P48437 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.64□□□□□ -0.23
Prox1P48437 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.64□□□□□ -0.23
Prox1P48437 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.64□□□□□ -0.23
Prox1P48437 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.64□□□□□ -0.23
Prox1P48437 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC13.64□□□□□ -0.23
Prox1P48437 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Prox1P48437 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.64□□□□□ -0.23
Prox1P48437 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Prox1P48437 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Prox1P48437 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.63□□□□□ -0.23
Prox1P48437 Gm3739-201ENSMUST00000165744 2011 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Prox1P48437 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Il11ra2-201ENSMUST00000108006 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.63□□□□□ -0.23
Prox1P48437 Hmgb1-rs17-201ENSMUST00000210634 972 ntBASIC13.63□□□□□ -0.23
Prox1P48437 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Batf-201ENSMUST00000040536 955 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Klk14-201ENSMUST00000056329 1271 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Prox1P48437 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC13.63□□□□□ -0.23
Prox1P48437 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.63□□□□□ -0.23
Prox1P48437 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.63□□□□□ -0.23
Prox1P48437 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Prox1P48437 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Prox1P48437 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Prox1P48437 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Prox1P48437 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.62□□□□□ -0.23
Prox1P48437 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.62□□□□□ -0.23
Prox1P48437 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.62□□□□□ -0.23
Prox1P48437 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Prox1P48437 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.62□□□□□ -0.23
Prox1P48437 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Prox1P48437 Gm9726-201ENSMUST00000180321 678 ntBASIC13.62□□□□□ -0.23
Prox1P48437 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Gm43935-201ENSMUST00000203569 1050 ntBASIC13.62□□□□□ -0.23
Prox1P48437 Olfr572-203ENSMUST00000215782 1233 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Prox1P48437 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC13.62□□□□□ -0.23
Prox1P48437 Gm18041-201ENSMUST00000218210 618 ntBASIC13.62□□□□□ -0.23
Prox1P48437 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Prox1P48437 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.62□□□□□ -0.23
Prox1P48437 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Prox1P48437 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms