Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Gm8176-201ENSMUST00000191297 1099 ntBASIC14.78□□□□□ -0.04
HttP42859 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
HttP42859 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.78□□□□□ -0.04
HttP42859 Gm826-202ENSMUST00000109475 803 ntAPPRIS ALT2 TSL 2 BASIC14.77□□□□□ -0.04
HttP42859 Gm14350-201ENSMUST00000116642 640 ntBASIC14.77□□□□□ -0.04
HttP42859 Gm4760-201ENSMUST00000119663 1030 ntBASIC14.77□□□□□ -0.04
HttP42859 Gm8908-201ENSMUST00000121633 1024 ntBASIC14.77□□□□□ -0.04
HttP42859 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HttP42859 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HttP42859 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
HttP42859 Gm37166-201ENSMUST00000195473 2474 ntBASIC14.77□□□□□ -0.04
HttP42859 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HttP42859 Gm42550-201ENSMUST00000201553 960 ntBASIC14.77□□□□□ -0.04
HttP42859 Gm45219-201ENSMUST00000205602 465 ntBASIC14.77□□□□□ -0.04
HttP42859 AC134254.1-201ENSMUST00000221362 167 ntBASIC14.77□□□□□ -0.04
HttP42859 Lats2-202ENSMUST00000038381 933 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HttP42859 Ankrd33-201ENSMUST00000070875 1442 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
HttP42859 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
HttP42859 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HttP42859 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
HttP42859 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
HttP42859 Mos-201ENSMUST00000105158 1449 ntAPPRIS P1 BASIC14.77□□□□□ -0.05
HttP42859 Gm17105-201ENSMUST00000163715 652 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HttP42859 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HttP42859 Gm33175-201ENSMUST00000211562 461 ntTSL 5 BASIC14.77□□□□□ -0.05
HttP42859 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HttP42859 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.77□□□□□ -0.05
HttP42859 Kbtbd2-202ENSMUST00000114323 3816 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HttP42859 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC14.77□□□□□ -0.05
HttP42859 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
HttP42859 Gm11618-201ENSMUST00000117946 267 ntBASIC14.77□□□□□ -0.05
HttP42859 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
HttP42859 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.76□□□□□ -0.05
HttP42859 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC14.76□□□□□ -0.05
HttP42859 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
HttP42859 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.76□□□□□ -0.05
HttP42859 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HttP42859 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.76□□□□□ -0.05
HttP42859 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HttP42859 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
HttP42859 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HttP42859 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.76□□□□□ -0.05
HttP42859 Gm26315-201ENSMUST00000083890 321 ntBASIC14.76□□□□□ -0.05
HttP42859 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
HttP42859 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC14.76□□□□□ -0.05
HttP42859 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
HttP42859 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.76□□□□□ -0.05
HttP42859 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC14.76□□□□□ -0.05
HttP42859 Gm13097-201ENSMUST00000210722 397 ntBASIC14.76□□□□□ -0.05
HttP42859 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC14.76□□□□□ -0.05
HttP42859 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
HttP42859 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC14.75□□□□□ -0.05
HttP42859 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Mrpl55-203ENSMUST00000108785 792 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Brk1-201ENSMUST00000035725 1095 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC14.75□□□□□ -0.05
HttP42859 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HttP42859 Gm12945-201ENSMUST00000140080 674 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Gm5896-201ENSMUST00000189662 1024 ntBASIC14.75□□□□□ -0.05
HttP42859 Gm43058-201ENSMUST00000197645 625 ntBASIC14.75□□□□□ -0.05
HttP42859 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Uckl1-201ENSMUST00000057816 1849 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC14.75□□□□□ -0.05
HttP42859 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
HttP42859 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Cdca3-201ENSMUST00000024270 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
HttP42859 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.75□□□□□ -0.05
HttP42859 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Cd27-202ENSMUST00000112281 832 ntTSL 3 BASIC14.75□□□□□ -0.05
HttP42859 Mcpt8-201ENSMUST00000015594 836 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Higd1c-201ENSMUST00000175683 507 ntAPPRIS P1 TSL 3 BASIC14.75□□□□□ -0.05
HttP42859 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC14.75□□□□□ -0.05
HttP42859 Lrrc52-201ENSMUST00000036643 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
HttP42859 Ssr1-204ENSMUST00000225319 1610 ntBASIC14.74□□□□□ -0.05
HttP42859 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC14.74□□□□□ -0.05
HttP42859 Tnfrsf18-202ENSMUST00000103173 1189 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Gm14726-201ENSMUST00000120623 896 ntBASIC14.74□□□□□ -0.05
HttP42859 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC14.74□□□□□ -0.05
HttP42859 Spata24-201ENSMUST00000025209 701 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Spata24-202ENSMUST00000096573 709 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
HttP42859 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 32.7 ms