Protein–RNA interactions for Protein: P40645

Sox6, Transcription factor SOX-6, mousemouse

Predictions only

Length 827 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox6P40645 Gm26756-201ENSMUST00000181689 1294 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Frmd5-213ENSMUST00000212518 922 ntTSL 5 BASIC13.35□□□□□ -0.27
Sox6P40645 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.35□□□□□ -0.27
Sox6P40645 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.35□□□□□ -0.27
Sox6P40645 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Calcb-201ENSMUST00000032902 962 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
Sox6P40645 Vmn1r198-202ENSMUST00000226786 6195 ntAPPRIS P2 BASIC13.34□□□□□ -0.27
Sox6P40645 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Sox6P40645 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox6P40645 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox6P40645 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Lrwd1-201ENSMUST00000006301 2473 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Sox6P40645 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Gm37844-201ENSMUST00000192473 4097 ntBASIC13.34□□□□□ -0.27
Sox6P40645 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.34□□□□□ -0.27
Sox6P40645 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox6P40645 Mymx-202ENSMUST00000169137 616 ntAPPRIS P4 TSL 2 BASIC13.34□□□□□ -0.27
Sox6P40645 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox6P40645 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.34□□□□□ -0.27
Sox6P40645 Bloc1s5-203ENSMUST00000224902 612 ntBASIC13.34□□□□□ -0.27
Sox6P40645 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.34□□□□□ -0.27
Sox6P40645 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC13.34□□□□□ -0.27
Sox6P40645 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Sox6P40645 Ntrk2-208ENSMUST00000225583 2719 ntBASIC13.33□□□□□ -0.27
Sox6P40645 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox6P40645 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC13.33□□□□□ -0.27
Sox6P40645 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox6P40645 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox6P40645 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox6P40645 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.33□□□□□ -0.27
Sox6P40645 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Sox6P40645 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Sox6P40645 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox6P40645 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.33□□□□□ -0.28
Sox6P40645 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox6P40645 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.33□□□□□ -0.28
Sox6P40645 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.33□□□□□ -0.28
Sox6P40645 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Sox6P40645 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox6P40645 Gm44492-201ENSMUST00000197012 141 ntBASIC13.33□□□□□ -0.28
Sox6P40645 Vmn2r-ps89-201ENSMUST00000209195 1010 ntBASIC13.33□□□□□ -0.28
Sox6P40645 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.33□□□□□ -0.28
Sox6P40645 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
Sox6P40645 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC13.33□□□□□ -0.28
Sox6P40645 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Sox6P40645 Acot6-202ENSMUST00000222921 3622 ntBASIC13.33□□□□□ -0.28
Sox6P40645 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.5 ms