Protein–RNA interactions for Protein: P35601

Rfc1, Replication factor C subunit 1, mousemouse

Predictions only

Length 1,131 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc1P35601 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.97□□□□□ -0.01
Rfc1P35601 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rfc1P35601 Cklf-201ENSMUST00000034342 667 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC14.97□□□□□ -0.01
Rfc1P35601 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
Rfc1P35601 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfc1P35601 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.97□□□□□ -0.01
Rfc1P35601 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Rfc1P35601 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.97□□□□□ -0.01
Rfc1P35601 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.96□□□□□ -0.01
Rfc1P35601 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Rfc1P35601 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC14.96□□□□□ -0.01
Rfc1P35601 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC14.96□□□□□ -0.01
Rfc1P35601 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rfc1P35601 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC14.96□□□□□ -0.01
Rfc1P35601 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Ndufb9-201ENSMUST00000022980 704 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
Rfc1P35601 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Rfc1P35601 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Rfc1P35601 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfc1P35601 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC14.96□□□□□ -0.02
Rfc1P35601 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfc1P35601 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Rfc1P35601 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Gm38355-201ENSMUST00000192514 1570 ntBASIC14.95□□□□□ -0.02
Rfc1P35601 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Gm25990-201ENSMUST00000102440 86 ntBASIC14.95□□□□□ -0.02
Rfc1P35601 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC14.95□□□□□ -0.02
Rfc1P35601 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.95□□□□□ -0.02
Rfc1P35601 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.95□□□□□ -0.02
Rfc1P35601 Gm6089-201ENSMUST00000197666 938 ntBASIC14.95□□□□□ -0.02
Rfc1P35601 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Aurkaip1-201ENSMUST00000084097 1159 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Gpr132-201ENSMUST00000021729 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Rfc1P35601 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
Rfc1P35601 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.95□□□□□ -0.02
Rfc1P35601 Gm5184-201ENSMUST00000220417 1702 ntBASIC14.95□□□□□ -0.02
Rfc1P35601 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Rfc1P35601 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.94□□□□□ -0.02
Rfc1P35601 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Rfc1P35601 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Rfc1P35601 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 AC154262.2-201ENSMUST00000224310 2293 ntBASIC14.94□□□□□ -0.02
Rfc1P35601 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC14.94□□□□□ -0.02
Rfc1P35601 Gm2308-201ENSMUST00000166539 1004 ntBASIC14.94□□□□□ -0.02
Rfc1P35601 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC14.94□□□□□ -0.02
Rfc1P35601 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC14.94□□□□□ -0.02
Rfc1P35601 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Rfc1P35601 AC164567.1-201ENSMUST00000219185 960 ntBASIC14.94□□□□□ -0.02
Rfc1P35601 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms