Protein–RNA interactions for Protein: P27548

Cd40lg, CD40 ligand, mousemouse

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd40lgP27548 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Wt1-202ENSMUST00000111099 2441 ntTSL 5 BASIC13.11□□□□□ -0.31
Cd40lgP27548 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Cd40lgP27548 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC13.11□□□□□ -0.31
Cd40lgP27548 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm22065-201ENSMUST00000103753 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm22066-201ENSMUST00000103761 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm24932-201ENSMUST00000103763 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm24115-201ENSMUST00000103799 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm22190-201ENSMUST00000103827 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm22191-201ENSMUST00000103831 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm24721-201ENSMUST00000103849 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm28018-201ENSMUST00000103869 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm26399-201ENSMUST00000103937 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm25349-201ENSMUST00000177728 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm23616-201ENSMUST00000177797 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm25871-201ENSMUST00000177816 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm24752-201ENSMUST00000178240 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm24496-201ENSMUST00000178287 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm25649-201ENSMUST00000178476 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm25548-201ENSMUST00000178681 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm23147-201ENSMUST00000178841 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm26095-201ENSMUST00000179270 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm22171-201ENSMUST00000179283 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm23936-201ENSMUST00000179354 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm22619-201ENSMUST00000179516 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm25255-201ENSMUST00000179579 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm24755-201ENSMUST00000179691 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm26506-201ENSMUST00000179692 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm25086-201ENSMUST00000179931 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm23243-201ENSMUST00000180047 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm24659-201ENSMUST00000180212 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm24169-201ENSMUST00000180244 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm23689-201ENSMUST00000180354 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm27359-201ENSMUST00000184153 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm27785-201ENSMUST00000184268 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm27466-201ENSMUST00000184396 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm27703-201ENSMUST00000184836 110 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Rnf138rt1-201ENSMUST00000059320 1191 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cd40lgP27548 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.11□□□□□ -0.31
Cd40lgP27548 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cd40lgP27548 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.11□□□□□ -0.31
Cd40lgP27548 Pex12-202ENSMUST00000108146 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.11□□□□□ -0.31
Cd40lgP27548 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Riox2-201ENSMUST00000023407 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cd40lgP27548 Sesn3-204ENSMUST00000208222 9125 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.1□□□□□ -0.31
Cd40lgP27548 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC13.1□□□□□ -0.31
Cd40lgP27548 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cd40lgP27548 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.1□□□□□ -0.31
Cd40lgP27548 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cd40lgP27548 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.1□□□□□ -0.31
Cd40lgP27548 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Cd40lgP27548 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Ropn1l-201ENSMUST00000110408 957 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Gm8410-201ENSMUST00000117225 605 ntBASIC13.1□□□□□ -0.31
Cd40lgP27548 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.1□□□□□ -0.31
Cd40lgP27548 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC13.1□□□□□ -0.31
Cd40lgP27548 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.1□□□□□ -0.31
Cd40lgP27548 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.1□□□□□ -0.31
Cd40lgP27548 Draxin-201ENSMUST00000030862 5200 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Cd40lgP27548 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 79.5 ms