Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Enkd1-201ENSMUST00000013299 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.63□□□□□ -0.23
BdnfP21237 Grip1os3-202ENSMUST00000146294 957 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Gm16026-204ENSMUST00000162652 683 ntBASIC13.63□□□□□ -0.23
BdnfP21237 Gm44596-201ENSMUST00000204223 647 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
BdnfP21237 Thap2-203ENSMUST00000218989 527 ntBASIC13.63□□□□□ -0.23
BdnfP21237 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.63□□□□□ -0.23
BdnfP21237 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.63□□□□□ -0.23
BdnfP21237 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
BdnfP21237 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
BdnfP21237 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Plxnb1-201ENSMUST00000072093 8649 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.62□□□□□ -0.23
BdnfP21237 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC13.62□□□□□ -0.23
BdnfP21237 Gm27301-201ENSMUST00000184012 127 ntBASIC13.62□□□□□ -0.23
BdnfP21237 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC13.62□□□□□ -0.23
BdnfP21237 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Zfp429-201ENSMUST00000109732 2056 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
BdnfP21237 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC13.61□□□□□ -0.23
BdnfP21237 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BdnfP21237 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Gm37105-201ENSMUST00000192251 2085 ntBASIC13.61□□□□□ -0.23
BdnfP21237 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Gm17968-201ENSMUST00000194902 784 ntBASIC13.61□□□□□ -0.23
BdnfP21237 Gm7229-201ENSMUST00000214719 1007 ntBASIC13.61□□□□□ -0.23
BdnfP21237 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.61□□□□□ -0.23
BdnfP21237 Psmb5-202ENSMUST00000227257 622 ntBASIC13.61□□□□□ -0.23
BdnfP21237 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
BdnfP21237 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.61□□□□□ -0.23
BdnfP21237 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.61□□□□□ -0.23
BdnfP21237 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.61□□□□□ -0.23
BdnfP21237 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.61□□□□□ -0.23
BdnfP21237 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Grk6-205ENSMUST00000224653 2976 ntBASIC13.61□□□□□ -0.23
BdnfP21237 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.61□□□□□ -0.23
BdnfP21237 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.61□□□□□ -0.23
BdnfP21237 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
BdnfP21237 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BdnfP21237 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BdnfP21237 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
BdnfP21237 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BdnfP21237 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
BdnfP21237 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.6□□□□□ -0.23
BdnfP21237 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
BdnfP21237 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BdnfP21237 Gm42928-201ENSMUST00000197338 3339 ntBASIC13.6□□□□□ -0.23
BdnfP21237 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
BdnfP21237 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.6□□□□□ -0.23
BdnfP21237 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
BdnfP21237 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms